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GST Refund Claims & Rejections

Export, LUT, inverted duty and excess cash refunds — and replies when a refund is rejected

Ideal for
Export, LUT, inverted duty and excess cash refunds — and replies when a refund is rejected
Eligibility and route check — IGST-paid exports or LUT, inverted duty, excess cash
Rule 89 refund working and statement preparation
RFD-01 filing with supporting invoices, shipping bills and FIRC/BRC
Replies to deficiency memos (RFD-03) and show cause notices (RFD-08)
Follow-up until the refund order, and appeal drafting if rejected
Starting price
Custom quote
Fixed quote
Within 2 working hours
Delivery
100% online
Reviewed by
A qualified CA
How it works
  1. 1Route checkWe confirm the refund type, period and the two-year deadline.
  2. 2WorkingRule 89 calculation tied to returns, shipping bills and books.
  3. 3File RFD-01Application with statements and documents uploaded.
  4. 4RespondDeficiency memos and RFD-08 notices answered on time.
Secure document handling Fixed price before we start WhatsApp updates at every step
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About GST Refund Claims & Rejections

A clear overview, in simple terms — what it is, why it matters, and how we handle it.

Quick answer

A GST refund is claimed in Form RFD-01 on the GST portal within two years of the relevant date. Exporters either pay IGST and get it back automatically against the shipping bill, or export under an LUT and claim refund of unused input tax credit. Businesses whose input tax rate is higher than their output rate can claim the accumulated credit under the inverted duty formula. If the officer proposes rejection, a notice in RFD-08 must be answered in RFD-09, and a rejection order can be appealed within three months.

Most refunds are lost or cut on paperwork, not law: a shipping bill that doesn't match GSTR-1, a Rule 89 working that includes ineligible credit, foreign exchange not received for services, or an application filed after the two-year limit. We prepare the claim so the numbers tie out before the officer sees them.

For zero-rated supplies — exports and supplies to SEZ units — 90% of the claim is generally released provisionally soon after acknowledgement, and the officer must decide the claim within 60 days of a complete application; delays beyond that carry interest. Deficiency memos (RFD-03) restart the clock, so a complete first filing matters.

When an officer proposes to reject all or part of a refund, the RFD-08 reply is the last chance to fix it at that level. We answer with reconciliations and case law, and file the appeal if a rejection order still follows.

Key facts — GST Refund Claims & Rejections
ApplicationForm GST RFD-01 on gst.gov.in
Time limitTwo years from the relevant date (Section 54)
Exports with IGST paidShipping bill treated as the refund application; matched with GSTR-1 and GSTR-3B
Exports under LUTRefund of unutilised ITC by the Rule 89(4) formula
Inverted dutyRule 89(5) formula; credit on input services is excluded
RejectionNotice RFD-08, reply RFD-09; order RFD-06; appeal within 3 months with 10% pre-deposit
Key highlights
Eligibility and route check — IGST-paid exports or LUT, inverted duty, excess cash
Rule 89 refund working and statement preparation
RFD-01 filing with supporting invoices, shipping bills and FIRC/BRC
Replies to deficiency memos (RFD-03) and show cause notices (RFD-08)
Follow-up until the refund order, and appeal drafting if rejected

Who this is for

Common scenarios where this service is a good fit.

  • Exporters of goods and services with input tax credit piling up
  • Businesses supplying to SEZ units
  • Manufacturers and traders with an inverted duty structure
  • Anyone with excess balance in the electronic cash ledger
  • Businesses whose refund was cut, delayed or rejected

What you get

Clear deliverables so you know exactly what's included.

  • Eligibility and route check — IGST-paid exports or LUT, inverted duty, excess cash
  • Rule 89 refund working and statement preparation
  • RFD-01 filing with supporting invoices, shipping bills and FIRC/BRC
  • Replies to deficiency memos (RFD-03) and show cause notices (RFD-08)
  • Follow-up until the refund order, and appeal drafting if rejected
Why Indus Tax?
CA-reviewed filing

Expert review before every submission — not just data entry.

Audit-ready documentation

Working notes and reconciliations you can rely on in future notices.

India + Global coverage

Resident Indians, NRIs, expats and cross-border businesses — all served.

Documents required

A practical checklist. We'll tell you if anything else is needed based on your case.

GSTR-1, GSTR-3B and GSTR-2B for the refund period
Export invoices and shipping bills, or SEZ endorsements
Bank realisation certificates or FIRCs for exports of services
Letter of Undertaking (for LUT exports)
Purchase register and credit details for inverted duty claims

* This is a base checklist. After a quick pre-check, we may ask for additional items specific to your case.

Process

A simple, trackable workflow — designed to avoid back-and-forth.

Step 1
Route check

We confirm the refund type, period and the two-year deadline.

Step 2
Working

Rule 89 calculation tied to returns, shipping bills and books.

Step 3
File RFD-01

Application with statements and documents uploaded.

Step 4
Respond

Deficiency memos and RFD-08 notices answered on time.

Step 5
Refund or appeal

Order tracked to credit; rejections taken to appeal.

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Get a quote

We share a clear quote on WhatsApp after a quick checklist pre-check.

How pricing works
  • Fixed quote on WhatsApp after a short look at your facts and documents.
  • Government fees, if any, are paid at actuals and shown separately.
Custom pricing: Quote confirmed on WhatsApp after a quick pre-check based on your case.
Why use a CA vs doing it yourself?
FactorDIYIndus Tax
Expert review❌✅
Notice risk reduction❌✅
Deduction optimisation❌✅
Audit-ready records❌✅
AIS/26AS reconciliation❌✅
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No hidden charges
Audit-ready documentation
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Talk to a qualified CA — 3 plans

Fee adjusted against our service fee if you go ahead within 30 days.

  • Priority CA Call-back
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    Talk one matter through properly with a CA.
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    Documents reviewed before the call, written action plan after.
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Call-backs run Mon–Sat, 9 AM–6 PM IST. Booked outside these hours? We call you first thing the next working morning.

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Frequently asked questions

Answers to the most common questions we get.

Search FAQs
4 results.
How long does a GST refund take?
For exports and SEZ supplies, 90% is generally released provisionally soon after the application is acknowledged, and the officer must pass the final order within 60 days of a complete application. Interest is payable if the refund is delayed beyond that. A deficiency memo means the application is treated as not filed, so the clock restarts.
Can service exporters claim a GST refund?
Yes. Exports of services under an LUT are zero-rated, and the input tax credit used for them can be refunded through RFD-01, provided payment is received in convertible foreign exchange (or in rupees where RBI permits) and the other export conditions are met.
Why was my GST refund rejected and what can I do?
Common reasons are mismatches between shipping bills and GSTR-1, ineligible credit in the Rule 89 working, missing proof of foreign exchange, or a claim filed after two years. Before rejecting, the officer must issue a notice in RFD-08; reply in RFD-09 with reconciliations. If a rejection order is still passed, appeal to the Appellate Authority within three months with a pre-deposit of 10% of the disputed amount.
Is input service credit refundable under the inverted duty structure?
No. The inverted duty refund formula in Rule 89(5) covers credit on inputs (goods) only, not on input services — the Supreme Court upheld this in 2021. Credit on input services stays in your ledger for use against output tax.

Official sources

Indus Tax is a private professional services firm and is not affiliated with any government authority. Rules and fees change — we confirm current positions before filing.